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openCyto gating
•
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0
votes
0
replies
1.2k
views
How to construct a polygon gate?
gating
opencyto gating
7.7 years ago
justinyi10
▴ 10
1
vote
0
replies
839
views
Don't understand what's causing this error
opencyto gating
7.7 years ago
justinyi10
▴ 10
0
votes
1
reply
1.0k
views
Error when gating from gating template
opencyto gating
7.7 years ago
justinyi10
▴ 10
0
votes
0
replies
861
views
Error while gating from gating template
opencyto gating
gating
bioconductor
7.7 years ago
justinyi10
▴ 10
0
votes
0
replies
877
views
Additional populations added when trying to gate from gating template
opencyto gating
7.7 years ago
justinyi10
▴ 10
0
votes
0
replies
851
views
Gating template for monocytes?
opencyto gating
7.7 years ago
justinyi10
▴ 10
0
votes
1
reply
932
views
Trying to read in a gating template causes error
opencyto gating
bioconductor
7.7 years ago
justinyi10
▴ 10
0
votes
0
replies
1.1k
views
Use "gating.template" on data.table
data.table
opencyto gating
csv files
R
7.8 years ago
Rivka
• 0
0
votes
1
reply
2.4k
views
Exporting FCS files from GatingSet
flowcore
opencyto gating
flowset
updated 8.1 years ago by
Jiang, Mike
★ 1.3k • written 8.1 years ago by
jordan.xanthopoulos
• 0
2
votes
1
reply
1.3k
views
openCyto working Example: expects {flowWorkspace} but example
opencyto
bioconductor
opencyto gating
updated 8.2 years ago by
Jiang, Mike
★ 1.3k • written 8.2 years ago by
Rivka
• 0
0
votes
1
reply
2.6k
views
reading an ".xml" file as FlowJo Workspace file
opencyto gating
opencyto
flowcore
flowworkspace
updated 8.9 years ago by
Jiang, Mike
★ 1.3k • written 8.9 years ago by
anara92
• 0
1
vote
1
reply
1.3k
views
OpenCyto -- time gate and border events
opencyto gating
flowcore
flow cytometry
updated 8.9 years ago by
Jiang, Mike
★ 1.3k • written 8.9 years ago by
Ulrik Stervbo
▴ 30
0
votes
2
replies
2.7k
views
OpenCyto -- proper gating of CD45
opencyto gating
flowworkspace
updated 8.9 years ago by
Jiang, Mike
★ 1.3k • written 8.9 years ago by
Ulrik Stervbo
▴ 30
1
vote
0
replies
1.7k
views
OpenCyto - getting the gates correct
opencyto gating
8.9 years ago
Ulrik Stervbo
▴ 30
4
votes
8
replies
3.3k
views
openCyto: usage and visualization of quadGate.tmix / collapsing data for flowClust
flowclust
opencyto
opencyto gating
updated 9.3 years ago by
Greg Finak
▴ 240 • written 9.4 years ago by
Viktor Thiel
• 0
0
votes
2
replies
1.9k
views
openCyto - how to get the MFI (mean fluorescence intensities)
opencyto gating
updated 9.4 years ago by
Jiang, Mike
★ 1.3k • written 9.4 years ago by
veronikag
• 0
5
votes
4
replies
3.5k
views
openCyto: Using combination gates (boolean gates)
opencyto
opencyto gating
FlowJo
updated 10.2 years ago by
Greg Finak
▴ 150 • written 10.2 years ago by
juancamilos
▴ 10
0
votes
5
replies
1.9k
views
openCyto automatic gating:
openCyto gating
10.5 years ago
thomas.mohr
▴ 20
18 results • Page
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Replies
Answer: Help with the code for "BiocNeighbors::generic_find_knn() function used by scran
by
Aaron Lun
★ 28k
It's calling C++ code, see the relevant function definitions on [GitHub](https://github.com/knncolle/BiocNeighbors/blob/master/src/generics…
Answer: DESeq2
by
ATpoint
★ 4.8k
Time courses are often inevitable batches but you should have done the library prep at the same day, just extract RNA per day. If not then …
Comment: Package developing and interoperation with Bioconductor
by
slizchap
• 0
Thank you so much for your answer. This was very useful, I will optimize my functions so they can handle SE objects.
Comment: Package developing and interoperation with Bioconductor
by
slizchap
• 0
Thank you so much for your answer, very useful!
Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files
by
Mike Smith
★ 6.6k
Tricky to try and debug this without some example files to work with. Can you provide the output of `traceback()` called immediately after…
Votes
Answer: Help with the code for "BiocNeighbors::generic_find_knn() function used by scran
Is it possible to speed up VariantAnnotation's rowRanges function when converting to a dataframe?
Answer: Is it possible to speed up VariantAnnotation's rowRanges function when convertin
Comment: ComBat with repeated measures
Answer: Package developing and interoperation with Bioconductor
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